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ag-ohlberger
dune-community
dune-gdt
Commits
ae25c375
Commit
ae25c375
authored
4 years ago
by
Dr. Felix Tobias Schindler
Committed by
Tobias Leibner
3 years ago
Browse files
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[P|discretefunction.bochner] add bindings
parent
77fa36ef
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1 merge request
!10
Draft: consolidate refactoring work
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3 changed files
python/dune/gdt/CMakeLists.txt
+7
-1
7 additions, 1 deletion
python/dune/gdt/CMakeLists.txt
python/dune/gdt/__init__.py
+1
-0
1 addition, 0 deletions
python/dune/gdt/__init__.py
python/dune/gdt/discretefunction/bochner.cc
+239
-0
239 additions, 0 deletions
python/dune/gdt/discretefunction/bochner.cc
with
247 additions
and
1 deletion
python/dune/gdt/CMakeLists.txt
+
7
−
1
View file @
ae25c375
...
@@ -13,7 +13,13 @@
...
@@ -13,7 +13,13 @@
file
(
GLOB_RECURSE header
"*.hh"
)
file
(
GLOB_RECURSE header
"*.hh"
)
dune_pybindxi_add_module
(
_discretefunction_discretefunction EXCLUDE_FROM_ALL
${
header
}
dune_pybindxi_add_module
(
_discretefunction_bochner
EXCLUDE_FROM_ALL
${
header
}
discretefunction/bochner.cc
)
dune_pybindxi_add_module
(
_discretefunction_discretefunction
EXCLUDE_FROM_ALL
${
header
}
discretefunction/discretefunction.cc
)
discretefunction/discretefunction.cc
)
dune_pybindxi_add_module
(
_discretefunction_dof_vector EXCLUDE_FROM_ALL
${
header
}
discretefunction/dof-vector.cc
)
dune_pybindxi_add_module
(
_discretefunction_dof_vector EXCLUDE_FROM_ALL
${
header
}
discretefunction/dof-vector.cc
)
dune_pybindxi_add_module
(
_functionals_interfaces_common EXCLUDE_FROM_ALL
${
header
}
functionals/interfaces_common.cc
)
dune_pybindxi_add_module
(
_functionals_interfaces_common EXCLUDE_FROM_ALL
${
header
}
functionals/interfaces_common.cc
)
...
...
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python/dune/gdt/__init__.py
+
1
−
0
View file @
ae25c375
...
@@ -16,6 +16,7 @@ from dune.xt import guarded_import
...
@@ -16,6 +16,7 @@ from dune.xt import guarded_import
from
dune.xt.common.vtk.plot
import
plot
from
dune.xt.common.vtk.plot
import
plot
for
mod_name
in
(
# order should not matter!
for
mod_name
in
(
# order should not matter!
'
_discretefunction_bochner
'
,
'
_discretefunction_discretefunction
'
,
'
_discretefunction_discretefunction
'
,
'
_discretefunction_dof_vector
'
,
'
_discretefunction_dof_vector
'
,
'
_functionals_interfaces_common
'
,
'
_functionals_interfaces_common
'
,
...
...
This diff is collapsed.
Click to expand it.
python/dune/gdt/discretefunction/bochner.cc
0 → 100644
+
239
−
0
View file @
ae25c375
// This file is part of the dune-gdt project:
// https://github.com/dune-community/dune-gdt
// Copyright 2010-2018 dune-gdt developers and contributors. All rights reserved.
// License: Dual licensed as BSD 2-Clause License (http://opensource.org/licenses/BSD-2-Clause)
// or GPL-2.0+ (http://opensource.org/licenses/gpl-license)
// with "runtime exception" (http://www.dune-project.org/license.html)
// Authors:
// Felix Schindler (2021)
#include
"config.h"
#include
<dune/pybindxi/pybind11.h>
#include
<dune/xt/grid/grids.hh>
#include
<python/dune/xt/la/traits.hh>
#include
<python/dune/xt/grid/grids.bindings.hh>
#include
<dune/xt/common/python.hh>
#include
<dune/xt/common/string.hh>
#include
<dune/xt/functions/interfaces/grid-function.hh>
#include
<dune/xt/grid/type_traits.hh>
#include
<dune/xt/la/container.hh>
#include
<python/dune/xt/common/exceptions.bindings.hh>
#include
<python/dune/xt/functions/interfaces/grid-function.hh>
#include
<python/dune/xt/grid/grids.bindings.hh>
#include
<python/dune/xt/grid/traits.hh>
#include
<python/dune/xt/la/traits.hh>
#include
<python/dune/xt/la/container.bindings.hh>
#include
<dune/gdt/discretefunction/bochner.hh>
namespace
Dune
{
namespace
GDT
{
namespace
bindings
{
template
<
class
V
,
class
MatchingVectorTag
,
class
GV
,
size_t
r
=
1
,
size_t
rC
=
1
,
class
R
=
double
>
class
DiscreteBochnerFunction
{
using
type
=
GDT
::
DiscreteBochnerFunction
<
V
,
GV
,
r
,
rC
,
R
>
;
using
G
=
typename
GV
::
Grid
;
using
BS
=
BochnerSpace
<
GV
,
r
,
rC
,
R
>
;
public:
using
bound_type
=
pybind11
::
class_
<
type
>
;
static
V
&
get_vec_ref
(
pybind11
::
handle
list_element
)
{
try
{
return
list_element
.
cast
<
V
&>
();
}
catch
(...)
{
}
// if we came that far the above did not work, try
try
{
return
list_element
.
attr
(
"impl"
).
cast
<
V
&>
();
}
catch
(...)
{
}
// if we came that far the above did not work, give up
DUNE_THROW
(
XT
::
Common
::
Exceptions
::
wrong_input_given
,
"Could convert Python object of type [1] to C++ type [2] when trying to convert list_of_vectors:"
<<
"
\n\n
"
<<
" - [1]: "
<<
pybind11
::
str
(
list_element
.
get_type
()).
cast
<
std
::
string
>
()
<<
"
\n
"
<<
" - [2]: "
<<
XT
::
Common
::
Typename
<
V
>::
value
()
<<
"&"
);
}
// ... get_vec_ref(...)
static
bound_type
bind
(
pybind11
::
module
&
m
,
const
std
::
string
&
layer_id
=
""
,
const
std
::
string
&
grid_id
=
XT
::
Grid
::
bindings
::
grid_name
<
G
>::
value
(),
const
std
::
string
&
class_id
=
"discrete_bochner_function"
)
{
namespace
py
=
pybind11
;
using
namespace
pybind11
::
literals
;
std
::
string
class_name
=
class_id
+
"_"
+
grid_id
;
if
(
!
layer_id
.
empty
())
class_name
+=
"_"
+
layer_id
;
if
(
r
>
1
)
class_name
+=
"_to_"
+
XT
::
Common
::
to_string
(
r
)
+
"d"
;
if
(
rC
>
1
)
class_name
+=
"x"
+
XT
::
Common
::
to_string
(
rC
)
+
"d"
;
class_name
+=
"_"
+
XT
::
LA
::
bindings
::
container_name
<
V
>::
value
();
const
auto
ClassName
=
XT
::
Common
::
to_camel_case
(
class_name
);
const
std
::
string
default_name
=
"dune.gdt.discretebochnerfunction"
;
bound_type
c
(
m
,
ClassName
.
c_str
(),
ClassName
.
c_str
());
c
.
def_property_readonly
(
"space"
,
&
type
::
space
);
c
.
def_property_readonly
(
"name"
,
&
type
::
name
);
c
.
def
(
"evaluate"
,
&
type
::
evaluate
,
"time"
_a
);
c
.
def
(
"visualize"
,
[](
type
&
self
,
const
std
::
string
&
filename_prefix
)
{
return
self
.
visualize
(
filename_prefix
,
VTK
::
appendedraw
);
},
"filename_prefix"
_a
);
m
.
def
(
XT
::
Common
::
to_camel_case
(
class_id
).
c_str
(),
[](
const
BS
&
bochner_space
,
py
::
list
list_of_vectors
,
const
MatchingVectorTag
&
,
const
std
::
string
&
name
)
{
// try to interprete list_of_vectors as a ListVectorArray of correct length
DUNE_THROW_IF
(
list_of_vectors
.
size
()
!=
bochner_space
.
temporal_space
().
mapper
().
size
(),
XT
::
Common
::
Exceptions
::
wrong_input_given
,
"list_of_vectors does not match bochner_space:"
<<
"
\n
"
<<
" bochner_space.spatial_space().mapper().size() = "
<<
bochner_space
.
spatial_space
().
mapper
().
size
()
<<
"
\n
"
<<
" list_of_vectors.size() = "
<<
list_of_vectors
.
size
());
auto
vector_array
=
std
::
make_unique
<
XT
::
LA
::
ListVectorArray
<
V
>>
(
/*dim=*/
bochner_space
.
spatial_space
().
mapper
().
size
(),
/*length=*/
0
,
/*reserve=*/
bochner_space
.
temporal_space
().
mapper
().
size
());
size_t
counter
=
0
;
auto
time_points
=
bochner_space
.
time_points
();
for
(
py
::
handle
list_element
:
list_of_vectors
)
{
auto
&
vec
=
get_vec_ref
(
list_element
);
vector_array
->
append
(
vec
,
{{
"_t"
,
{
time_points
[
counter
]}}});
}
return
new
type
(
bochner_space
,
vector_array
.
release
(),
name
);
},
"space"
_a
,
"list_of_vectors"
_a
,
"vector_type"
_a
,
"name"
_a
=
default_name
,
py
::
keep_alive
<
0
,
1
>
(),
py
::
keep_alive
<
0
,
2
>
());
if
(
std
::
is_same
<
MatchingVectorTag
,
XT
::
LA
::
bindings
::
Istl
>::
value
)
m
.
def
(
XT
::
Common
::
to_camel_case
(
class_id
).
c_str
(),
[](
const
BS
&
bochner_space
,
py
::
list
list_of_vectors
,
const
std
::
string
&
name
,
const
MatchingVectorTag
&
)
{
// try to interprete list_of_vectors as a ListVectorArray of correct length
DUNE_THROW_IF
(
list_of_vectors
.
size
()
!=
bochner_space
.
temporal_space
().
mapper
().
size
(),
XT
::
Common
::
Exceptions
::
wrong_input_given
,
"list_of_vectors does not match bochner_space:"
<<
"
\n
"
<<
" bochner_space.spatial_space().mapper().size() = "
<<
bochner_space
.
spatial_space
().
mapper
().
size
()
<<
"
\n
"
<<
" list_of_vectors.size() = "
<<
list_of_vectors
.
size
());
auto
vector_array
=
std
::
make_unique
<
XT
::
LA
::
ListVectorArray
<
V
>>
(
/*dim=*/
bochner_space
.
spatial_space
().
mapper
().
size
(),
/*length=*/
0
,
/*reserve=*/
bochner_space
.
temporal_space
().
mapper
().
size
());
size_t
counter
=
0
;
auto
time_points
=
bochner_space
.
time_points
();
for
(
py
::
handle
list_element
:
list_of_vectors
)
{
auto
&
vec
=
get_vec_ref
(
list_element
);
vector_array
->
append
(
vec
,
{{
"_t"
,
{
time_points
[
counter
]}}});
}
return
new
type
(
bochner_space
,
vector_array
.
release
(),
name
);
},
"space"
_a
,
"list_of_vectors"
_a
,
"name"
_a
=
default_name
,
"vector_type"
_a
=
XT
::
LA
::
bindings
::
Istl
(),
py
::
keep_alive
<
0
,
1
>
(),
py
::
keep_alive
<
0
,
2
>
());
m
.
def
(
XT
::
Common
::
to_camel_case
(
class_id
).
c_str
(),
[](
const
BS
&
space
,
const
MatchingVectorTag
&
,
const
std
::
string
&
name
)
{
return
make_discrete_bochner_function
<
V
>
(
space
,
name
);
},
"space"
_a
,
"vector_type"
_a
,
"name"
_a
=
default_name
,
py
::
keep_alive
<
0
,
1
>
());
if
(
std
::
is_same
<
MatchingVectorTag
,
XT
::
LA
::
bindings
::
Istl
>::
value
)
m
.
def
(
XT
::
Common
::
to_camel_case
(
class_id
).
c_str
(),
[](
const
BS
&
space
,
const
std
::
string
&
name
,
const
MatchingVectorTag
&
)
{
return
make_discrete_bochner_function
<
V
>
(
space
,
name
);
},
"space"
_a
,
"name"
_a
=
default_name
,
"vector_type"
_a
=
XT
::
LA
::
bindings
::
Istl
(),
py
::
keep_alive
<
0
,
1
>
());
return
c
;
}
// ... bind(...)
};
// class DiscreteBochnerFunction
}
// namespace bindings
}
// namespace GDT
}
// namespace Dune
template
<
class
V
,
class
VT
,
class
GridTypes
=
Dune
::
XT
::
Grid
::
bindings
::
AvailableGridTypes
>
struct
DiscreteBochnerFunction_for_all_grids
{
using
G
=
Dune
::
XT
::
Common
::
tuple_head_t
<
GridTypes
>
;
using
GV
=
typename
G
::
LeafGridView
;
static
const
constexpr
size_t
d
=
G
::
dimension
;
static
void
bind
(
pybind11
::
module
&
m
)
{
using
Dune
::
GDT
::
bindings
::
DiscreteBochnerFunction
;
DiscreteBochnerFunction
<
V
,
VT
,
GV
>::
bind
(
m
);
if
(
d
>
1
)
DiscreteBochnerFunction
<
V
,
VT
,
GV
,
d
>::
bind
(
m
);
// add your extra dimensions here
// ...
DiscreteBochnerFunction_for_all_grids
<
V
,
VT
,
Dune
::
XT
::
Common
::
tuple_tail_t
<
GridTypes
>>::
bind
(
m
);
}
};
template
<
class
V
,
class
VT
>
struct
DiscreteBochnerFunction_for_all_grids
<
V
,
VT
,
Dune
::
XT
::
Common
::
tuple_null_type
>
{
static
void
bind
(
pybind11
::
module
&
/*m*/
)
{}
};
PYBIND11_MODULE
(
_discretefunction_bochner
,
m
)
{
namespace
py
=
pybind11
;
using
namespace
Dune
;
using
namespace
Dune
::
XT
;
using
namespace
Dune
::
GDT
;
py
::
module
::
import
(
"dune.xt.common"
);
py
::
module
::
import
(
"dune.xt.la"
);
py
::
module
::
import
(
"dune.xt.grid"
);
py
::
module
::
import
(
"dune.xt.functions"
);
py
::
module
::
import
(
"dune.gdt._discretefunction_discretefunction"
);
py
::
module
::
import
(
"dune.gdt._spaces_bochner"
);
DiscreteBochnerFunction_for_all_grids
<
LA
::
CommonDenseVector
<
double
>
,
LA
::
bindings
::
Common
,
XT
::
Grid
::
bindings
::
AvailableGridTypes
>::
bind
(
m
);
#if HAVE_EIGEN
DiscreteBochnerFunction_for_all_grids
<
LA
::
EigenDenseVector
<
double
>
,
LA
::
bindings
::
Eigen
,
XT
::
Grid
::
bindings
::
AvailableGridTypes
>::
bind
(
m
);
#endif
DiscreteBochnerFunction_for_all_grids
<
LA
::
IstlDenseVector
<
double
>
,
LA
::
bindings
::
Istl
,
XT
::
Grid
::
bindings
::
AvailableGridTypes
>::
bind
(
m
);
}
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