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Samples for PACXX

Moved to https://gitlab.dune-project.org/joe/sample-kernels

pyMOR - Model Order Reduction with Python

Benchmarks (Repo)

Core library containing basic functions dealing with biological sequences, domains, phylogeny and related data.

Detect 6 types of rearrangement events for protein domain arrangements and their fraction for a set of proteomes across a given phylogeny.

Program to search for domain arrangements

A fast domain annotation program.

Set of small programs that can help to check/handle DomainWorld data.

Analysis tool for hybrid Petri nets with general transitions.